Data from: Archosauromorph extinction selectivity during the Triassic-Jurassic mass extinction

  • Bethany Allen (Contributor)
  • Thomas L. Stubbs (Contributor)
  • Michael J Benton (Contributor)
  • Mark N. Puttick (Contributor)

Dataset

Description

Many traits have been linked to extinction risk among modern vertebrates, including mode of life and body size. However, previous work has indicated there is little evidence that body size, or any other trait, was selective during past mass extinctions. Here, we investigate the impact of the Triassic–Jurassic mass extinction on early Archosauromorpha (basal dinosaurs, crocodylomorphs and their relatives) by focusing on body size and other life history traits. We built several new archosauromorph maximum‐likelihood supertrees, incorporating uncertainty in phylogenetic relationships. These supertrees were then employed as a framework to test whether extinction had a phylogenetic signal during the Triassic–Jurassic mass extinction, and whether species with certain traits were more or less likely to go extinct. We find evidence for phylogenetic signal in extinction, in that taxa were more likely to become extinct if a close relative also did. However, there is no correlation between extinction and body size, or any other tested trait. These conclusions add to previous findings that body size, and other traits, were not subject to selection during mass extinctions in closely‐related clades, although the phylogenetic signal in extinction indicates that selection may have acted on traits not investigated here.,AppendicesA. Summary table of archosauromorphs, median femur lengths and ages B. KH and SH test outputs C. Phylo-D outputs for supertrees C, D and E D. PGLS outputs for supertrees C, D and EArchosaur femur dataAll collected femur data with notesArchosaur mode of life dataTable of modes of life for each archosauromorph speciesOcc_dataOccurrence data in an R-suitable formatOcc_data_femursOcc_data with femur length column includedAndresNexus file suitable for IQTREECabreiraNexus file suitable for IQTREEEzcurraNexus file suitable for IQTREEKammererNexus file suitable for IQTREENesbittNexus file suitable for IQTREEParkerNexus file suitable for IQTREE1_Equal_MBL_scalingR code for Equal and MBL scaling2a_Excel_to_timelistR code for converting occurrence data to a timelist object2b_cal3_ratesR code for calculating cal3 input rates2c_cal3_scalingR code for cal3 scaling3_Hedman_scalingR code for Hedman scaling4_pgls_phylo_d_codeR code for running Phylo-D and PGLS tests2015 Cohen datesText file of dates used for time periodsML taxa-matched treesIQTREE output phylogenies with synonymous taxa matched, suitable for R analysisProposed supertreesEight proposed supertree topologies, suitable for R analysisreadmeSummary of appendices and supplementary data contents,
Date made available21 Aug 2019
PublisherDryad

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