Research Output

Article (Academic Journal)

(DP2)-P-2: database of disordered protein predictions

Oates, M., Romero, P., Ishida, T., Ghalwash, M., Mizianty, M. J., Xue, B., Dosztanyi, Z., Uversky, V. N., Obradovic, Z., Kurgan, L., Dunker, A. K. & Gough, J., Jan 2013, In : Nucleic Acids Research. 41, D1, p. D508-D516 9 p.

Research output: Contribution to journalArticle (Academic Journal)

271 Citations (Scopus)

Abduction and Induction in Artificial Intelligence

Kakas, A. C. & Flach, P., 2009, In : Journal of Applied Logic. 7(3), 251-251.

Research output: Contribution to journalArticle (Academic Journal)

3 Citations (Scopus)

A Big Data platform for smart meter data analytics

Wilcox, T., Jin, N., Flach, P. & Thumim, J., Feb 2019, In : Computers in Industry. 105, p. 250-259 10 p.

Research output: Contribution to journalArticle (Academic Journal)

10 Citations (Scopus)

A bipolar model of assertability and belief

Lawry, J. & Gonzalez Rodriguez, I., 2011, In : International Journal of Approximate Reasoning. p. 76–91

Research output: Contribution to journalArticle (Academic Journal)

14 Citations (Scopus)

A bipolar model of vague concepts based on random set and prototype theory

Yongchuan, T. & Lawry, J., 2012, In : International Journal of Approximate Reasoning. p. 867–879

Research output: Contribution to journalArticle (Academic Journal)

5 Citations (Scopus)

A black box for online approximate pattern matching

Clifford, R., Klim, E., Benny, P. & Ely, P., 2011, In : Information and Computation. 209, 4, p. 731-736

Research output: Contribution to journalArticle (Academic Journal)

13 Citations (Scopus)

A Black Box for Online Approximate Pattern Matching

Clifford, R., Klim, E., Benny, P. & Ely, P., 2008, In : Combinatorial Pattern Matching. 5029/2008, p. 143 - 151 9 p.

Research output: Contribution to journalArticle (Academic Journal)

9 Citations (Scopus)

A Ca2+-based Computational Model for NMDA Receptor-Dependent Synaptic Plasticity at Individual Postsynaptic Spines in the Hippocampus

Rackham, OJL., Tsaneva-Atanasova, KT., Ganesh, AJ. & Mellor, JR., Jul 2010, In : Frontiers in Synaptic Neuroscience. 2, p. 1 - 12 12 p.

Research output: Contribution to journalArticle (Academic Journal)

A canonical circuit for generating phase-amplitude coupling

Onslow, A. C. E., Jones, M. & Bogacz, R., 2014, In : PLoS ONE. 9, 8, p. e102591

Research output: Contribution to journalArticle (Academic Journal)

32 Citations (Scopus)

A cloned linguistic decision tree controller for real-time path planning in hostile environments

Turnbull, O. D. N., Lawry, J., Lowenberg, M. H. & Richards, A. G., 15 Jun 2016, In : Fuzzy Sets and Systems. 293, p. 1-29 29 p.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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8 Citations (Scopus)
339 Downloads (Pure)

A comparative study of evolving fuzzy grammar and machine learning techniques for text categorization

Sharef, N. M., Martin, T., Kasmiran, K. A., Mustapha, A., Sulaiman, M. N. & Murad, M. A. A., Jun 2015, In : Soft Computing. 19, 6, p. 1701-1714 14 p.

Research output: Contribution to journalArticle (Academic Journal)

3 Citations (Scopus)

A comparison of bounded diffusion models for choice in time controlled tasks

Jiaxiang, Z., Bogacz, R. & Holmes, P., 2009, In : Journal of Mathematical Psychology. 53, 231-241.

Research output: Contribution to journalArticle (Academic Journal)

11 Citations (Scopus)

A compliant soft-actuator laterotactile display

Knoop, L. E. & Rossiter, J. M., 10 Mar 2015, In : Smart Materials and Structures. 24, 9 p., 045034 .

Research output: Contribution to journalArticle (Academic Journal)

5 Citations (Scopus)

A Compliant Telescopic Limb with Anisotropic Stiffness

Fishman, A., Garrad, M., Hinitt, A. D., Rodrigues De Oliveira Zanini, P., Barker, T. & Rossiter, J., 1 Feb 2017, In : Frontiers in Robotics and AI. 3, 8 p., 80.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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407 Downloads (Pure)

A Comprehensive Study of Activity Recognition using Accelerometers

Twomey, N., Diethe, T., Fafoutis, X., Elsts, A., McConville, R., Flach, P. & Craddock, I., Jun 2018, In : Informatics. 5, 2, 37 p., 27.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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33 Citations (Scopus)
338 Downloads (Pure)

Active-elastic bistable minimum energy structures

Follador, M., Conn, A. T., Mazzolai, B. & Rossiter, J. M., 6 Oct 2014, In : Applied Physics Letters. 105, 14, 141903.

Research output: Contribution to journalArticle (Academic Journal)

13 Citations (Scopus)

Activities of daily living ontology for ubiquitous systems: Development and evaluation

Woznowski, P. R., Tonkin, E. L. & Flach, P. A., Jul 2018, In : Sensors. 18, 7, 23 p., 2361.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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3 Citations (Scopus)
347 Downloads (Pure)

Activity recognition in multiple contexts for smart-house data

Sokol, K. & Flach, P., 22 Jun 2016, In : CEUR Workshop Proceedings. 1865, p. 66-72 7 p.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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57 Downloads (Pure)

A daily-updated tree of (sequenced) life as a reference for genome research

Fang, H., Oates, M., Pethica, R. B., Greenwood, J. M., Sardar, A. J., Rackham, O. J. L., Donoghue, P. C. J., Stamatakis, A., Morais, D. A. D. L. & Gough, J., 18 Jun 2013, In : Scientific Reports. 3, p. 2015 10 p., 2015.

Research output: Contribution to journalArticle (Academic Journal)

36 Citations (Scopus)

Adaptive sampling of information in perceptual decision-making

Cassey, T., Evens, D. R., Bogacz, R., Marshall, J. A. R. & Ludwig, C. J. H., 2013, In : PLoS ONE. 8, 11, e78993.

Research output: Contribution to journalArticle (Academic Journal)

9 Citations (Scopus)

Adding "foveal vision'' to Wilson's animat

Cliff, D. & Bullock, S., Jun 1993, In : Adaptive Behavior. 2, 1, p. 49-72 24 p.

Research output: Contribution to journalArticle (Academic Journal)

17 Citations (Scopus)

A disease-drug-phenotype matrix inferred by walking on a functional domain network

Fang, H. & Gough, J., 4 Jul 2013, In : Molecular bioSystems. 9, 7, p. 1686-96 11 p.

Research output: Contribution to journalArticle (Academic Journal)

8 Citations (Scopus)

A domain-centric solution to functional genomics via dcGO Predictor

Fang, H. & Gough, J., 2013, In : BMC Bioinformatics. 14 Suppl 3, p. S9

Research output: Contribution to journalArticle (Academic Journal)

16 Citations (Scopus)

A filtering algorithm for k-mismatch with don't cares

Clifford, R. & Ely, P., Oct 2010, In : Information Processing Letters. 110, p. 1021 - 1025 5 p.

Research output: Contribution to journalArticle (Academic Journal)

5 Citations (Scopus)

A Financial Brokerage Model for Cloud Computing

Rogers, O. R. & Cliff, D., 12 Apr 2012, In : Journal of Cloud Computing: Advances, Systems, and Applications. 1, 2, p. 1 -12

Research output: Contribution to journalArticle (Academic Journal)

49 Citations (Scopus)

A General Approach to the Measurement of Change in Fuzzy Concept Lattices

Martin, T. P., Abd Rahim, N. H. & Majidian, A., 2013, In : Soft Computing.

Research output: Contribution to journalArticle (Academic Journal)

14 Citations (Scopus)

A label semantics approach to linguistic hedges

Lewis, M. & Lawry, J., Jul 2014, In : International Journal of Approximate Reasoning. 55, 5, p. 1147-1163 17 p.

Research output: Contribution to journalArticle (Academic Journal)

8 Citations (Scopus)

A large-scale evaluation of computational protein function prediction

Radivojac, P., Clark, W. T., Oron, T. R., Schnoes, A. M., Wittkop, T., Sokolov, A., Graim, K., Funk, C., Verspoor, K., Ben-Hur, A., Pandey, G., Yunes, J. M., Talwalkar, A. S., Repo, S., Souza, M. L., Piovesan, D., Casadio, R., Wang, Z., Cheng, J., Fang, H. & 82 others, Gough, J., Koskinen, P., Törönen, P., Nokso-Koivisto, J., Holm, L., Cozzetto, D., Buchan, D. W. A., Bryson, K., Jones, D. T., Limaye, B., Inamdar, H., Datta, A., Manjari, S. K., Joshi, R., Chitale, M., Kihara, D., Lisewski, A. M., Erdin, S., Venner, E., Lichtarge, O., Rentzsch, R., Yang, H., Romero, A. E., Bhat, P., Paccanaro, A., Hamp, T., Kaßner, R., Seemayer, S., Vicedo, E., Schaefer, C., Achten, D., Auer, F., Boehm, A., Braun, T., Hecht, M., Heron, M., Hönigschmid, P., Hopf, T. A., Kaufmann, S., Kiening, M., Krompass, D., Landerer, C., Mahlich, Y., Roos, M., Björne, J., Salakoski, T., Wong, A., Shatkay, H., Gatzmann, F., Sommer, I., Wass, M. N., Sternberg, M. J. E., Skunca, N., Supek, F., Bošnjak, M., Panov, P., Džeroski, S., Smuc, T., Kourmpetis, Y. A. I., van Dijk, A. D. J., Braak, C. J. F. T., Zhou, Y., Gong, Q., Dong, X., Tian, W., Falda, M., Fontana, P., Lavezzo, E., Di Camillo, B., Toppo, S., Lan, L., Djuric, N., Guo, Y., Vucetic, S., Bairoch, A., Linial, M., Babbitt, P. C., Brenner, S. E., Orengo, C., Rost, B., Mooney, S. D. & Friedberg, I., 2013, In : Nature Methods. 10, 3, p. 221-7 7 p.

Research output: Contribution to journalArticle (Academic Journal)

449 Citations (Scopus)

A linguistic decision tree approach to predicting storm surge

Royston, S., Lawry, J. & Horsburgh, K., 16 Mar 2013, In : Fuzzy Sets and Systems. 215, p. 90-111 22 p.

Research output: Contribution to journalArticle (Academic Journal)

7 Citations (Scopus)

All-soft Skin-like Structures for Robotic Locomotion and Transportation

Guo, J., Xiang, C. Q., Conn, A. T. & Rossiter, J. M., 15 Nov 2019, In : Soft Robotics. 12 p.

Research output: Contribution to journalArticle (Academic Journal)

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A marginalized variational Bayesian approach to the analysis of array data

Ying, Y., Li, P. & Campbell, I. C. G., 17 Dec 2008, In : BMC Proceedings. 2 (Suppl 4), 7 p., 57.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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225 Downloads (Pure)

A model of multi-agent consensus for vague and uncertain beliefs

Crosscombe, M. & Lawry, J., Aug 2016, In : Adaptive Behavior. 24, 4, p. 249-260 12 p.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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5 Citations (Scopus)
263 Downloads (Pure)

A multi-scale fuzzy compression scheme for heterogeneous data streams

Martin, TP. & Majidian, A., 2011, In : IEEE Transactions on Fuzzy Systems. to appear

Research output: Contribution to journalArticle (Academic Journal)

An Analysis of the Interaction Between Intelligent Software Agents and Human Users

Burr, C., Cristianini, N. & Ladyman, J., 1 Dec 2018, In : Minds and Machines. 28, 4, p. 735-774 40 p.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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10 Citations (Scopus)
409 Downloads (Pure)

An Application of Hierarchical Gaussian Processes to the Detection of Anomalies in Star Light Curves

Twomey, N., Chen, H., Diethe, T. & Flach, P., 21 May 2019, In : Neurocomputing. 342, p. 152-163 12 p.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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1 Citation (Scopus)
70 Downloads (Pure)

An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man

Ravasi, T., Gough, J. & FANTOM, C., Mar 2010, In : Cell. 140, 5, p. 744-752 9 p.

Research output: Contribution to journalArticle (Academic Journal)

An end-to-end machine learning system for harmonic analysis of music

Ni, Y., McVicar, M., Santos Rodriguez, R. & De Bie, T. E. P., Feb 2012, In : IEEE Transactions on Audio, Speech, and Language Processing. 20, 6, p. 1771-1783

Research output: Contribution to journalArticle (Academic Journal)

45 Citations (Scopus)

Animal Biometrics: quantifying and detecting phenotypic appearance

Kuehl, H. & Burghardt, T., 2013, In : Trends in Ecology and Evolution. 28, 7, p. 432-441

Research output: Contribution to journalArticle (Academic Journal)

75 Citations (Scopus)

An Infomax algorithm can perform both familiarity discrimination and feature extraction in a single network

Lulham, A., Bogacz, R., Vogt, S. & Brown, M. W., 2011, In : Neural Computation. 23, 4, p. 909-26 18 p.

Research output: Contribution to journalArticle (Academic Journal)

17 Citations (Scopus)

An Integrative Approach to Predicting the Functional Effects of Non-Coding and Coding Sequence Variation

Shihab, H. A., Rogers, M. F., Gough, J. J. T., Mort, M., Cooper, D. N., Day, I. N. M., Gaunt, T. R. & Campbell, I. C. G., 15 May 2015, In : Bioinformatics. 31, 10, p. 1536–1543

Research output: Contribution to journalArticle (Academic Journal)

197 Citations (Scopus)

An integrative approach to predicting the functional effects of small indels in non-coding regions of the human genome

Ferlaino, M., Rogers, M. F., Shihab, H. A., Mort, M., Cooper, D. N., Gaunt, T. R. & Campbell, C., 6 Oct 2017, In : BMC Bioinformatics. 18, 1, 442.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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7 Citations (Scopus)
255 Downloads (Pure)

An Ordinal Model of Risk Based on Mariner’s Judgement

Lopez-Santander, A. & Lawry, J., Mar 2017, In : Journal of the Institute of Navigation. 70, 2, p. 309-324 16 p.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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12 Citations (Scopus)
347 Downloads (Pure)

A Novel Stratification Framework for Predicting Outcome in Patients with Prostate Cancer

Campbell, I. C. G., Luca, B., Moulton, V., Ellis, C., Edwards, D. R., Cooper, R., Clark, J., Brewer, D. & Campbell, C., 20 Mar 2020, In : British Journal of Cancer.

Research output: Contribution to journalArticle (Academic Journal)

Open Access

A pathway-based data integration framework for prediction of disease progression

Seoane, J. A., Day, I. N. M., Gaunt, T. R. & Campbell, C., 1 Mar 2014, In : Bioinformatics. 30, 6, p. 838-845 8 p.

Research output: Contribution to journalArticle (Academic Journal)

34 Citations (Scopus)

A Pathway-centric Approach to Rare Variant Association Analysis

Richardson, T., Timpson, N., Campbell, C. & Gaunt, T., Jan 2017, In : European Journal of Human Genetics. 25, 1, p. 123-129 7 p.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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2 Citations (Scopus)
262 Downloads (Pure)

Application of rule based methods to predicting storm surge

Royston, S. J., Horsburgh, K. & Lawry, J., 2012, In : Continental Shelf Research. p. 79–91

Research output: Contribution to journalArticle (Academic Journal)

2 Citations (Scopus)

Appropriateness measures: an uncertainty model for vague concept

Lawry, J., 2008, In : Synthese. 161, p. 255 - 269

Research output: Contribution to journalArticle (Academic Journal)

49 Citations (Scopus)

A predictive computational framework for direct reprogramming between human cell types

Rackham, O. J. L., Firas, J., Fang, H., Oates, M. E., Holmes, M. L., Knaupp, A. S., the FANTOM Consortium, Suzuki, H., Nefzger, C. M., Daub, C. O., Shin, J. W., Petretto, E., Forrest, A. R. R., Hayashizaki, Y., Polo, J. M. & Gough, J., Mar 2016, In : Nature Genetics. 48, 3, p. 331-335 5 p.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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105 Citations (Scopus)
535 Downloads (Pure)

A promoter-level mammalian expression atlas

Forrest, A. R. R., Kawaji, H., Rehli, M., Baillie, J. K., de Hoon, M. J. L., Haberle, V., Lassmann, T., Kulakovskiy, I. V., Lizio, M., Itoh, M., Andersson, R., Mungall, C. J., Meehan, T. F., Schmeier, S., Bertin, N., Jørgensen, M., Dimont, E., Arner, E., Schmidl, C., Schaefer, U. & 31 others, Medvedeva, Y. A., Plessy, C., Vitezic, M., Severin, J., Semple, C. A., Ishizu, Y., Young, R. S., Francescatto, M., Alam, I., Albanese, D., Altschuler, G. M., Arakawa, T., Archer, J. A. C., Arner, P., Babina, M., Rennie, S., Balwierz, P. J., Beckhouse, A. G., Pradhan-Bhatt, S., Blake, J. A., Blumenthal, A., Bodega, B., Bonetti, A., Briggs, J., Brombacher, F., Burroughs, A. M., Fang, H., Gough, J., de Lima Morais, D. A., Rackham, O. J. L. & FANTOM Consortium and the RIKEN PMI and CLST (DGT), 27 Mar 2014, In : Nature. 507, 7493, p. 462-70 9 p.

Research output: Contribution to journalArticle (Academic Journal)

856 Citations (Scopus)

A protein domain and family based approach to rare variant association analysis

Richardson, T., Shihab, H., Rivas, M. A., McCarthy, M. I., Campbell, C., Timpson, N. & Gaunt, T., 29 Apr 2016, In : PLoS ONE. 11, 4, 12 p., e0153803.

Research output: Contribution to journalArticle (Academic Journal)

Open Access
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2 Citations (Scopus)
259 Downloads (Pure)