Personal profile
Research interests
I am primarily interested in virus host cell interactions with an emphasis on respiratory viruses, in particular adenovirus, but also coronaviruses, respiratory syncytial virus, influenza and Hendra virus. I have been looking at how these viruses interact with the host cell using state of the art techniques including laser confocal microscopy, high throughput quantitative mass spectrometry and Deep Sequencing (or Next Generation Sequencing) of virus infected cells. In collaboration with Prof Davidson here at Bristol we also apply these techniques to the study of Dengue virus.
Most recently we have become very interested in the study of novel zoonotic agents such as SARS CoV-2, Hendra, MERS CoV and Ebola. We are at the forefront of developing novel intergrated high throughput methods to study these very dangerous viruses in their natural hosts (bats) to try to understand why they are apparently harmless to their natural host but highly lethal in humans.
In addition, we also use these high throughput approaches to study recombinant gene therapy systems (especially adenovirus based ones). This includes an emphasis on the molecular basis of oncolytic or cancer killing adenoviruses.
Fingerprint
- 1 Similar Profiles
Collaborations and top research areas from the last five years
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Characterisation of the transcriptome and proteome of SARS-CoV-2 reveals a cell passage induced in-frame deletion of the furin-like cleavage site from the spike glycoprotein
Davidson, A. D., Kavanagh Williamson, M., Lewis, S. D., Shoemark, D. K., Carroll, M. W., Heesom, K. J., Zambon, M., Ellis, J., Lewis, P. A., Hiscox, J. A. & Matthews, D. A., 28 Jul 2020, In: Genome Medicine. 12, 15 p., 68.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile281 Citations (Scopus)244 Downloads (Pure) -
De novo derivation of proteomes from transcriptomes for transcript and protein identification
Evans, V. C., Barker, G., Heesom, K. J., Fan, J., Bessant, C. & Matthews, D. A., Dec 2012, In: Nature Methods. 9, 12, p. 1207-11 5 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
140 Citations (Scopus) -
SARS-CoV-2 vaccine ChAdOx1 nCoV-19 infection of human cell lines reveals low levels of viral backbone gene transcription alongside very high levels of SARS-CoV-2 S glycoprotein gene transcription
Almuqrin, A., Davidson, A. D., Kavanagh Williamson, M., Lewis, P. A., Heesom, K. J., Morris, S., Gilbert, S. C. & Matthews, D. A., 15 Mar 2021, In: Genome Medicine. 13, 1, 17 p., 43 (2021).Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access42 Citations (Scopus)145 Downloads (Pure)
Projects
- 4 Finished
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SARS-CoV-2 genetic diversity and stability in the presence of neutralizing antibodies and antivirals
Matthews, D. A. (Principal Investigator)
2/11/20 → 1/05/21
Project: Research
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Enabling advanced analytics for all users of the proteomics facility
Dowsey, A. (Principal Investigator), Davidson, A. D. (Co-Investigator), Heesom, K. J. (Co-Investigator), Matthews, D. A. (Co-Investigator) & Wuelfing, C. (Co-Investigator)
1/01/18 → 8/06/21
Project: Research
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Adapting high throughput technologies to understand the process of viral zoonosis
Matthews, D. A. (Principal Investigator)
4/01/16 → 3/01/20
Project: Research
Datasets
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SARS CoV 2 ORF10KO paper raw data
Matthews, D. A. (Creator), Zenodo, 12 Jul 2023
DOI: 10.5281/zenodo.8139581, https://zenodo.org/record/8139581
Dataset
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Chadox HIV vaccine data
David, M. (Creator), Zenodo, 12 May 2023
DOI: 10.5281/zenodo.7930906, https://zenodo.org/record/7930906
Dataset
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direct RNA seq data, triplicate of RSV - strain A2 in Calu-3 cells at 48 hours post infection
Matthews, D. (Creator), Zenodo, 6 Sept 2022
DOI: 10.5281/zenodo.7101886, https://zenodo.org/record/7101886
Dataset
Activities
- 1 Other
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Hosted a visiting academic here to lean new techniques
Matthews, D. A. (Host)
1 May 2013 → 14 May 2013Activity: Other activity types › Other