Research output per year
Research output per year
Research output
- 14 Article (Academic Journal)
- 14 results
Search results
-
2022
Direct RNA sequencing of Respiratory Syncytial Virus infected human cells generates a detailed overview of RSV polycistronic mRNA and transcript abundance.
Donovan-Banfield, IA., Milligan, R., Hall, S., Gao, T., Murphy, E. M. R., Li, J. B., Shalwi, G., Hiscox, J., Zhuang, X., McKeating, J., Fearns, R. & Matthews, D. A., 10 Nov 2022, In: PLoS ONE. 17, 11, p. 1-20 e0276697.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile3 Citations (Scopus)11 Downloads (Pure) -
2020
Characterisation of the transcriptome and proteome of SARS-CoV-2 reveals a cell passage induced in-frame deletion of the furin-like cleavage site from the spike glycoprotein
Davidson, A. D., Kavanagh Williamson, M., Lewis, S. D., Shoemark, D. K., Carroll, M. W., Heesom, K. J., Zambon, M., Ellis, J., Lewis, P. A., Hiscox, J. A. & Matthews, D. A., 28 Jul 2020, In: Genome Medicine. 12, 15 p., 68.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile217 Citations (Scopus)148 Downloads (Pure) -
Deep splicing plasticity of the human adenovirus type 5 transcriptome drives virus evolution
Donovan-Banfield, IA., Turnell, A. S., Hiscox, J. A., Leppard, K. N. & Matthews, D. A., 13 Mar 2020, In: Communications Biology. 3, 14 p., 124 (2020).Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile27 Citations (Scopus)99 Downloads (Pure) -
Neuropilin-1 is a host factor for SARS-CoV-2 infection
Daly, J., Simonetti, B., Klein, K., Kavanagh Williamson, M., Anton Plagaro, C., Shoemark, D. K., Sessions, R. B., Matthews, D. A., Davidson, A. D., Cullen, P. J. & Yamauchi, Y., 13 Nov 2020, In: Science. 370, 6518, p. 861-865 5 p., eabd3072.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile751 Citations (Scopus)133 Downloads (Pure) -
2019
High Resolution Analysis of Respiratory Syncytial Virus Infection In Vivo
Aljabr, W., Armstrong, S., Rickett, N. Y., Pollakis, G., Touzelet, O., Cloutman-Green, E., Matthews, D. A. & Hiscox, J. A., 10 Oct 2019, In: Viruses. 11, 10, 16 p., 926.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile6 Citations (Scopus)143 Downloads (Pure) -
2018
High throughput discovery of protein variants using proteomics informed by transcriptomics
Matthews, D., Bessant, C. & Saha, S., 30 Apr 2018, (E-pub ahead of print) In: Nucleic Acids Research.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile4 Citations (Scopus)259 Downloads (Pure) -
PITDB: a database of translated genomic elements
Saha, S., Chatzimichali, E. A., Matthews, D. A. & Bessant, C., 4 Jan 2018, In: Nucleic Acids Research. 46, D1, p. D1223-D1228 6 p., gkx906.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile1 Citation (Scopus)231 Downloads (Pure) -
Zika virus infection preferentially counterbalances human peripheral monocyte and/or NK cell activity
Lum, F. M., Lee, D., Chua, T. K., Tan, J. J. L., Lee, C. Y. P., Liu, X., Fang, Y., Lee, B., Yee, W. X., Rickett, N. Y., Chia, P. Y., Lim, V., Leo, Y. S., Matthews, D. A., Hiscox, J. A. & Nga, L. F. P., 28 Mar 2018, In: mSphere. 3, 2, e00120-18.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile23 Citations (Scopus)389 Downloads (Pure) -
2017
Comparison of protein expression during wild-type, and E1B-55k-deletion, adenovirus infection using quantitative time-course proteomics
Fu, Y. R., Turnell, A. S., Davis, S., Heesom, K. J., Evans, V. C. & Matthews, D. A., 20 Jun 2017, In: Journal of General Virology. 98, 6, p. 1377-1388 12 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile9 Citations (Scopus)336 Downloads (Pure) -
Deep sequencing of RNA from blood and oral swab samples reveals the presence of nucleic acid from a number of pathogens in patients with acute Ebola virus disease and is consistent with bacterial translocation across the gut
Carroll, M. W., Haldenby, S., Rickett, N. Y., Pályi, B., Garcia-Dorival, I., Liu, X., Barker, G., Bore, J. A., Koundouno, F. R., Williamson, E. D., Laws, T. R., Kerber, R., Sissoko, D., Magyar, N., Di Caro, A., Biava, M., Fletcher, T. E., Sprecher, A., Ng, L. F. P., Rénia, L., & 6 others, 23 Aug 2017, In: mSphere. 2, 4, 19 p., e00325-17.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile23 Citations (Scopus)556 Downloads (Pure) -
Proteomics Informed by Transcriptomics for Characterising Active Transposable Elements and Genome Annotation in Aedes Aegypti
Maringer, K., Yousuf, A., Heesom, K., Fan, J., Lee, D., Fernandez-Sesma, A., Bessant, C., Matthews, D. & Davidson, A., 19 Jan 2017, In: BMC Genomics. 18, 18 p., 101.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile33 Citations (Scopus)451 Downloads (Pure) -
Proteomics informed by transcriptomics for characterising differential cellular susceptibility to Nelson Bay orthoreovirus infection
Mok, L., Wynne, J. W., Tachedjian, M., Shiell, B. J., Ford, K., Matthews, D., Bacic, A. & Michalski, W. P., 14 Aug 2017, In: BMC Genomics. 18, 615, 17 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile4 Citations (Scopus)357 Downloads (Pure) -
Transcriptomic signatures differentiate survival from fatal outcomes in humans infected with Ebola virus
Liu, X., Matthews, D., Connor, J. H., Carroll, M. W. & Hiscox, J. A., 19 Jan 2017, In: Genome Biology. 18, 17 p., 4.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile87 Citations (Scopus)385 Downloads (Pure) -
Virus genomes reveal factors that spread and sustained the Ebola epidemic
Dudas, G. & et al., 20 Apr 2017, In: Nature. 544, 7650, p. 309-315 7 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile245 Citations (Scopus)386 Downloads (Pure)