Neoproterozoic - Phanerozoic transition

Research output

Research output per year 2017 2017 2018 2019 2020 2021 2022 2023

• 44 Article (Academic Journal)
• 2 Review article (Academic Journal)
• 1 Chapter in a book
• 1 Comment/debate (Academic Journal)

Research output per year

Research output per year

Search results

• 2023

  Constraining whole-genome duplication events in geological time

  Clark, J. W. & Donoghue, P. C. J., 1 Feb 2023, Polyploidy: Methods and Protocols. Springer Nature, Vol. 2545. p. 139-154 16 p. (Methods in Molecular Biology).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter in a book

  Open Access

  • Age 100%
  • Estimating 100%
  • Clock 100%
  • Flowering 100%
  • Information 50%

• Postcranial disparity of galeaspids and the evolution of swimming speeds in stem-gnathostomes

  Gai, Z. K., Lin, X., Shan, X., Ferron Jimenez, H. G. & Donoghue, P. C. J., 27 Feb 2023, (E-pub ahead of print) In: National Science Review.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  • Speed 100%
  • Tail 100%
  • Fin 66%
  • Evolution 66%
  • Fins 66%

• The unbearable uncertainty of panarthropod relationships

  Wu, R., Pisani, D. & Donoghue, P. C. J., 11 Jan 2023, In: Biology Letters. 19, 1, p. 20220497 17 p., 20220497.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Tardigrada 100%
  • Onychophora 100%
  • Cladistics 75%
  • Monophyly 50%
  • Filopodia 50%
  20 Downloads (Pure)
• 2022

  Divergent evolutionary trajectories of bryophytes and tracheophytes from a complex common ancestor of land plants

  Harris, B. J., Clark, J. W., Schrempf, D., Szöllősi, G. J., Donoghue, P. C. J., Hetherington, A. M. & Williams, T. A., 29 Sept 2022, In: Nature Ecology and Evolution. 6, 11, p. 1634–1643 10 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Plant 100%
  • Vascular Plant 100%
  • Moss 100%
  • Land 100%
  • Bryophyte 100%
  7 Citations (Scopus)

  10 Downloads (Pure)

• Evolution of fungal phenotypic disparity

  Smith, T. & Donoghue, P. C. J., 15 Aug 2022, In: Nature Ecology and Evolution. 6, 10, p. 1489-1500 12 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Animal 100%
  • Evolution 100%
  • Time 50%
  • Fungus 50%
  • Morphotype 50%
  27 Downloads (Pure)

• Internal anatomy of a fossilized embryonic stage of the Cambrian-Ordovician scalidophoran Markuelia

  Dong, X-P., Duan, B., Liu, J. & Donoghue, P. C. J., 5 Oct 2022, (E-pub ahead of print) In: Royal Society Open Science. 9, 10, 9 p., 220115.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Fossil 100%
  • Preservation 75%
  • Mineralization 75%
  • Investigation 50%
  • Specimen 50%
  8 Downloads (Pure)

• Saccorhytus is an early ecdysozoan and not the earliest deuterostome

  Liu, Y., Carlisle, E. M., Zhang, H., Yang, B., Steiner, M., Shao, T., Duan, B., Marone, F., Xiao, S. & Donoghue, P. C. J., 17 Aug 2022, In: Nature. 609, 7927, p. 541-546 6 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Deuterostomia 100%
  • Fauna 75%
  • Animal 75%
  • Ecdysozoa 75%
  • Animals 75%
  25 Downloads (Pure)

• The origin and early evolution of plants

  Bowles, A. M. C., Williamson, C. J., Williams, T., Lenton, T. M. & Donoghue, P. C. J., 31 Oct 2022, (E-pub ahead of print) In: Trends in Plant Science. 28, 3, p. 312-329 18 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Plant 100%
  • Earth 80%
  • Evolution 60%
  • Biosphere 40%
  • Genomics 40%
  14 Downloads (Pure)
• 2021

  Diversification dynamics of total-, stem-, and crown-groups are compatible with molecular clock estimates of divergence times

  Beavan, A. J. S., Pisani, D. & Donoghue, P. C. J., 11 Jun 2021, In: Science Advances. 7, 24, 8 p., eabf2257.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Stems 100%
  • Extinction 75%
  • Age 50%
  • Prediction 50%
  • Fossils 50%
  6 Citations (Scopus)

  67 Downloads (Pure)

• Exceptionally preserved early Cambrian bilaterian developmental stages from Mongolia

  Steiner, M., Yang, B., Hohl, S., Li, D. & Donoghue, P., 15 Feb 2021, In: Nature Communications. 12, 1, 10 p., 1037 (2021).

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Developmental Stage 100%
  • Cambrian 60%
  • Sclerite 60%
  • Mongolia 40%
  • Brachiopod 40%
  6 Citations (Scopus)

  43 Downloads (Pure)

• Experimental taphonomy of organelles and the fossil record of early eukaryote evolution

  Carlisle, E. M., Jobbins, M., Pankhania, V., Cunningham, J. A. & Donoghue, P. C. J., 27 Jan 2021, In: Science Advances. 7, 5, 8 p., eabe9487.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Fossils 100%
  • Fossil Record 66%
  • Decay 50%
  • Eukaryote 50%
  • Chloroplast 50%
  15 Citations (Scopus)

  54 Downloads (Pure)

• Fossilization processes have little impact on tip-calibrated divergence time analyses

  O'Reilly, J. E. & Donoghue, P. C. J., Sep 2021, In: Palaeontology. 64, 5, p. 687-697 11 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Datum 100%
  • Age 62%
  • Impact 50%
  • Morphology 50%
  • Estimate 37%
  7 Downloads (Pure)

• Phylogenetic sampling affects evolutionary patterns of morphological disparity

  Smith, T. J., Puttick, M. N., O'Reilly, J. E., Pisani, D. & Donoghue, P. C. J., 22 Oct 2021, In: Palaeontology. 64, 6, p. 765-787 23 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Sampling 100%
  • Morphology 100%
  • Tree 100%
  • Trees 100%
  • Cladistics 83%
  2 Citations (Scopus)

  53 Downloads (Pure)

• The developmental biology of Charnia and the eumetazoan affinity of the Ediacaran rangeomorphs

  Dunn, F. S., Liu, A. G., Grazhdankin, D. V., Vixseboxse, P., Flannery-Sutherland, J., Green, E., Harris, S., Wilby, P. & Donoghue, P. C. J., 23 Jul 2021, In: Science Advances. 7, 30, p. 1-13 13 p., eabe0291.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Fauna 100%
  • Phylogenetics 100%
  • Ediacaran 100%
  • Affinity 66%
  • Datum 33%
  14 Citations (Scopus)

  65 Downloads (Pure)

• The evolutionary emergence of land plants

  Donoghue, P. C. J., Harrison, C. J., Paps Montserrat, J. & Schneider, H., 11 Oct 2021, In: Current Biology. 31, 19, p. R1281-R1298 18 p.

  Research output: Contribution to journal › Review article (Academic Journal) › peer-review

  Open Access

  File

  • Plant 100%
  • Land 100%
  • Bryophyte 80%
  • Vascular Plant 60%
  • Tracheophyte 40%
  260 Downloads (Pure)

• Ultrastructure and in-situ chemical characterization of intracellular granules of embryo-like fossils from the early Ediacaran Weng’an biota

  Sun, W., Yin, Z., Pengju, L., Donoghue, P. C. J., Li, J. & Zhu, M., 6 Dec 2021, In: PalZ. 95, p. 611–621 (2021) 11 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Embryo 100%
  • Fossil 87%
  • Cell Division 37%
  • Ediacaran 37%
  • Investigation 25%
  39 Downloads (Pure)
• 2020

  A novel approach to investigate the effect of tree reconstruction artifacts in single gene analysis clarifies opsin evolution in non-bilaterian metazoans

  Fleming, J. F., Feuda, R., Roberts, N. W. & Pisani, D., 7 Feb 2020, In: Genome Biology and Evolution. evaa015.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Opsin 100%
  • Nested Gene 85%
  • Phylogeny 85%
  • Evolution 57%
  • Animal 42%
  8 Citations (Scopus)

  65 Downloads (Pure)

• Developmental biology of Helicoforamina reveals holozoan affinity, cryptic diversity and adaptation to heterogeneous environments

  Yin, Z., Sun, W., Pengju, L., Zhu, M. & Donoghue, P. C. J., 12 Jun 2020, In: Science Advances. 6, 24, 11 p., eabb0083.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Biota 100%
  • Developmental Stage 100%
  • Fossil 75%
  • Embryo 75%
  • Cells 75%
  45 Downloads (Pure)

• Disparities in the analysis of morphological disparity

  Guillerme, T., Natalie, C., Brusatte, S., Davis, K., Jackson, A., Gerber, S., Goswami, A., Healy, K., Hopkins, M., Jones, M., Lloyd, G., O'Reilly, J. E., Pate, A., Puttick, M. N., Rayfield, E. J., Saupe, E., Sherratt, E., Slater, G., Weisbecker, V., Thomas, G., & 1 othersDonoghue, P. C. J., 29 Jul 2020, In: Biology Letters. 16, 7, 8 p.

  Research output: Contribution to journal › Review article (Academic Journal) › peer-review

  Open Access

  File

  • Disparity 100%
  • Morphology 60%
  • Analysis 40%
  • Introspection 20%
  • Biological Product 20%
  44 Downloads (Pure)

• Nucleus preservation in early Ediacaran Weng’an embryo-like fossils, experimental taphonomy of nuclei, and implications for reading the eukaryote fossil record

  Sun, W., Yin, Z., Cunningham, J. A., Pengju, L., Zhu, M. & Donoghue, P. C. J., 12 Jun 2020, In: Interface Focus. 10, 4, 10 p., 20200015.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Fossils 100%
  • Taphonomy 85%
  • Fossil 57%
  • Cells 57%
  • Fossil Record 42%
  13 Citations (Scopus)

  62 Downloads (Pure)

• Performance of a priori and a posteriori calibration strategies in divergence time estimation

  Beavan, A. J. S., Donoghue, P. C. J., Beaumont, M. A. & Pisani, D., 22 May 2020, In: Genome Biology and Evolution. 12, 7, p. 1087-1098 12 p., evaa105.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Time 100%
  • Divergence 80%
  • Calibration 60%
  • Clock 60%
  • Posteriori 60%
  7 Citations (Scopus)

  38 Downloads (Pure)

• The origin and rise of complex life: progress requires interdisciplinary integration and hypothesis testing

  Wood, R., Donoghue, P. C. J., Lenton, T. M., Liu, A. G. S. C. & Poulton, S. W., 12 Jun 2020, (E-pub ahead of print) In: Interface Focus. 10, 4, 10 p.

  Research output: Contribution to journal › Article (Academic Journal)

  Open Access

  File

  • Life 100%
  • Datum 66%
  • Actuator 33%
  • Society 33%
  • Model 33%
  10 Citations (Scopus)

  152 Downloads (Pure)
• 2019

  Anatomy of the Ediacaran rangeomorph Charnia masoni

  Dunn, F. S., Wilby, P. R., Kenchington, C. G., Grazhdankin, D. V., Donoghue, P. C. J. & Liu, A. G., 1 Feb 2019, In: Papers in Palaeontology. 5, 1, p. 157-176 20 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Variation 100%
  • Investigation 75%
  • Morphology 75%
  • Ediacaran 75%
  • Order 50%
  10 Citations (Scopus)

  283 Downloads (Pure)

• Cellular preservation of excysting developmental stages of new eukaryotes from the early Ediacaran Weng'an Biota

  Landon, E. N. U., Liu, P-J., Yin, Z-J., Sun, W-C., Shang, X-D. & Donoghue, P. C. J., 1 Dec 2019, In: Palaeoworld. 28, 4, p. 461-468 8 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Ediacaran 100%
  • Fauna 60%
  • Embryo 60%
  • Microfossil 60%
  • Biota 40%
  4 Citations (Scopus)

  77 Downloads (Pure)

• Probabilistic methods outperform parsimony in the phylogenetic analysis of data simulated without a probabilistic model

  Puttick, M. N., O'Reilly, J. E., Pisani, D. & Donoghue, P. C. J., Jan 2019, In: Palaeontology. 62, 1, p. 1-17 17 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Model 100%
  • Data Set 50%
  • Datum 30%
  • Symbol 30%
  • Consistency 30%
  31 Citations (Scopus)

  237 Downloads (Pure)

• The apparatus composition and architecture of Erismodus quadridactylus and the implications for element homology in prioniodinin conodonts

  Dhanda, R., Murdock, D. J. E., Repetski, J. E., Donoghue, P. C. J. & Smith, M. P., 1 Nov 2019, In: Papers in Palaeontology. 5, 4, p. 657-677 21 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Architecture 100%
  • Array 60%
  • Analogy 40%
  • Homology 40%
  • Implication 20%
  3 Citations (Scopus)

  122 Downloads (Pure)

• The Early Ediacaran Caveasphaera Foreshadows the Evolutionary Origin of Animal-like Embryology

  Yin, Z., Vargas, K., Cunningham, J., Bengtson, S., Zhu, M., Marone, F. & Donoghue, P., 16 Dec 2019, In: Current Biology. 29, 24, p. 4307-4314.e2 11 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Ediacaran 100%
  • Volume 66%
  • Fauna 66%
  • Biota 66%
  • Subject 33%
  16 Citations (Scopus)

  40 Downloads (Pure)

• The effect of fossil sampling on the estimation of divergence times with the fossilised birth death process

  O'Reilly, J. & Donoghue, P., 17 May 2019, (Accepted/In press) In: Systematic Biology. syz037.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • divergence 100%
  237 Downloads (Pure)

• The impact of fossil stratigraphic ranges on tip-calibration, and the accuracy and precision of divergence time estimates

  Püschel, H., O'Reilly, J., Pisani, D. & Donoghue, P., 21 Aug 2019, In: Palaeontology. 17 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Tip 100%
  • Calibration 89%
  • Fossil 60%
  • Datum 40%
  • Time 40%
  14 Citations (Scopus)

  92 Downloads (Pure)

• Tubular microfossils from the Ediacaran Weng’an Biota (Doushantuo Formation, South China) are not early animals

  Wei-Chen, S., Yin, Z., Donoghue, P., Pengju, L., Xiao-Dong, S. & Zhu, M., 2 May 2019, (E-pub ahead of print) In: Palaeoworld. 9 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Microfossil 100%
  • Blue-Green Alga 75%
  • Alga 75%
  • Ediacaran 75%
  • Taxon 75%
  4 Citations (Scopus)

  122 Downloads (Pure)
• 2018

  Empirical realism of simulated data is more important than the model used to generate it: a reply to Goloboff et al.

  O'Reilly, J. E., Puttick, M. N., Pisani, D. & Donoghue, P. C. J., 1 Jul 2018, In: Palaeontology. 61, 4, p. 631-635 5 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Realism 100%
  • Simulation Mode 100%
  • Simulated Data 100%
  20 Citations (Scopus)

  327 Downloads (Pure)

• Evolution of metazoan morphological disparity

  Deline, B., Greenwood, J. M., Clark, J. W., Puttick, M. N., Peterson, K. J. & Donoghue, P. C. J., 18 Sept 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 38, p. E8909-E8918 10 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Animal 100%
  • Morphology 71%
  • Protein Domain 42%
  • Cladistics 42%
  • Evolution 28%
  50 Citations (Scopus)

  487 Downloads (Pure)

• Experimental analysis of soft-tissue fossilization – opening the black box

  Purnell, M. A., Donoghue, P., Gabbott, S. E., McNamara, M. E., Murdock, D. J. E. & Sansom, R., 20 Mar 2018, (E-pub ahead of print) In: Palaeontology. 61, 3

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • maturation 39%
  • researchers 14%
  • history 7%
  38 Citations (Scopus)

  221 Downloads (Pure)

• Integrated genomic and fossil evidence illuminates life’s early evolution and eukaryote origin

  Betts, H. C., Puttick, M. N., Clark, J. W., Williams, T. A., Donoghue, P. C. J. & Pisani, D., Oct 2018, In: Nature Ecology and Evolution. 2, 10, p. 1556-1562 7 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Life 100%
  • Fossil 62%
  • Evolution 25%
  • Alpha Oxidation 25%
  • Mitochondrion 25%
  186 Citations (Scopus)

  478 Downloads (Pure)

• The Efficacy of Consensus Tree Methods for Summarizing Phylogenetic Relationships from a Posterior Sample of Trees Estimated from Morphological Data

  O'Reilly, J. & Donoghue, P., 1 Mar 2018, In: Systematic Biology. 67, 2, p. 354-362 9 p., syz086.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Tree 100%
  • Trees 100%
  • Cladistics 56%
  • Consensus 37%
  • Sample 25%
  29 Citations (Scopus)

  211 Downloads (Pure)

• The nature of aspidin and the evolutionary origin of bone

  Keating, J., Marone, F., Donoghue, P. & Marquart, C. L., 1 Sept 2018, In: Nature Ecology and Evolution. 2, 9, p. 1501-1506 6 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Bone 100%
  • Cells 25%
  • Dentin 18%
  • Tissues 12%
  • Microscopy 6%
  17 Citations (Scopus)

  283 Downloads (Pure)

• Unicellular Origin of the Animal MicroRNA Machinery

  Bråte, J., Neumann, R., Fromm, B., Haraldsen, A., Tarver, J., Suga, H., Donoghue, P., Peterson, K. J., Ruiz-Trillo, I., Grini, P. & Shalchian-Tabrizi, K., 22 Oct 2018, In: Current Biology. 28, 20, p. 3288-3295.e5 14 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Animal 100%
  • MicroRNA 44%
  • Nested Gene 22%
  • Gene 22%
  • Contrast 11%
  29 Citations (Scopus)

  522 Downloads (Pure)

• Well-annotated microRNAomes do not evidence pervasive miRNA loss

  Tarver, J., Taylor, R., Puttick, M., Lloyd, G., Pett, W., Fromm, B., Schirrmeister, B., Pisani, D., Peterson, K. J. & Donoghue, P., 18 May 2018, (E-pub ahead of print) In: Genome Biology and Evolution. 10, 6, p. 1457-1470

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • phylogeny 31%
  • family 12%
  22 Citations (Scopus)

  235 Downloads (Pure)
• 2017

  Ediacaran developmental biology

  Dunn, F., Liu, A. & Donoghue, P., 3 Nov 2017, (E-pub ahead of print) In: Biological Reviews. 19 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Ediacaran 100%
  • Metazoan 50%
  • Datum 33%
  • Affinity 33%
  • Morphology 33%
  64 Citations (Scopus)

  434 Downloads (Pure)

• Nuclei and nucleoli in embryo-like fossils from the Ediacaran Weng’an Biota

  Yin, Z., Cunningham, J., Vargas, K., Bengtson, S., Zhu, M. & Donoghue, P., Oct 2017, In: Precambrian Research. 301, p. 145-151 7 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Fossil 100%
  • Biota 100%
  • Embryo 100%
  • Ediacaran 100%
  • Eukaryote 100%
  27 Citations (Scopus)

  315 Downloads (Pure)

• Open data and digital morphology

  Davies, T., Rahman, I., Lautenschlager, S., Cunningham, J. A., Asher, R. J., Barrett, P. M., Bates, K. T., Bengtson, S., Benson, R. B. J., Boyer, D. M., Braga, J., Bright, J. A., Claessens, L. P. A. M., Cox, P. G., Dong, X-P., Evans, A. R., Falkingham, P. L., Friedman, M., Garwood, R. J., Goswami, A., & 25 othersHutchinson, J. R., Jeffery, N. S., Johanson, Z., Lebrun, R., Martínez-Pérez, C., Marugán-Lobón, J., O'Higgins, P. M., Metscher, B., Orliac, M., Rowe, T. B., Rücklin, M., Sánchez-Villagra, M. R., Shubin, N. H., Smith, S. Y., Starck, J. M., Stringer, C., Summers, A. P., Sutton, M. D., Walsh, S. A., Weisbecker, V., Witmer, L. M., Wroe, S., Yin, Z., Rayfield, E. J. & Donoghue, P. C. J., 12 Apr 2017, In: Proceedings of the Royal Society B: Biological Sciences. 284, 1852, 10 p., 20170194.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Investigation 100%
  • Digital Data 66%
  • Datum 66%
  • Morphology 66%
  • Set 33%
  102 Citations (Scopus)

  419 Downloads (Pure)

• Parsimony and Maximum Likelihood phylogenetic analyses of morphology do not generally integrate uncertainty in inferring evolutionary history: A response to Brown et al.

  Puttick, M. N., O’Reilly, J. E., Oakley, D., Tanner, A. R., Fleming, J. F., Clark, J., Holloway, L., Lozano-Fernandez, J., Parry, L. A., Tarver, J. E., Pisani, D. & Donoghue, P. C. J., 11 Oct 2017, In: Proceedings of the Royal Society B: Biological Sciences. 284, 1864, 3 p., 20171636.

  Research output: Contribution to journal › Comment/debate (Academic Journal) › peer-review

  Open Access

  File

  • History 100%
  • Response 100%
  • Morphology 100%
  • Phylogenetics 100%
  20 Citations (Scopus)

  278 Downloads (Pure)

• Probabilistic methods surpass parsimony when assessing clade support in phylogenetic analyses of discrete morphological data

  O'Reilly, J., Puttick, M., Pisani, D. & Donoghue, P., 31 Oct 2017, (E-pub ahead of print) In: Palaeontology. 14 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Bayesian 100%
  • Maximum Likelihood 80%
  • Inference 40%
  • Trees 40%
  • Bayesian Inference 40%
  53 Citations (Scopus)

  382 Downloads (Pure)

• RelTime rates collapse to a strict clock when estimating the timeline of animal diversification

  Lozano-Fernandez, J., dos Reis, M., Donoghue, P. & Pisani, D., 1 May 2017, In: Genome Biology and Evolution. 9, 5, p. 1320-1328 9 p., evx079.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Fauna 100%
  • Clock 100%
  • Time 42%
  • Algorithms 28%
  • Model 28%
  21 Citations (Scopus)

  262 Downloads (Pure)

• Testing the molecular clock using mechanistic models of fossil preservation and molecular evolution

  Warnock, R. C. M., Yang, Z. & Donoghue, P. C. J., 28 Jun 2017, In: Proceedings of the Royal Society B: Biological Sciences. 284, 1857, 10 p., 20170227.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Fossil 100%
  • Time 71%
  • Clock 71%
  • Calibration 57%
  • Model 42%
  35 Citations (Scopus)

  280 Downloads (Pure)

• The early Cambrian fossil embryo Pseudooides is a direct developing cnidarian, not an early ecdysozoan

  Baichuan, D., Dong, X-P., Porras, L., Vargas, K., Cunningham, J. & Donoghue, P., 20 Dec 2017, In: Proceedings of the Royal Society B: Biological Sciences. 284, 1869, 10 p., 20172188.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Symmetry 100%
  • Embryo 100%
  • Cambrian 66%
  • Germ 66%
  • Shape 33%
  20 Citations (Scopus)

  284 Downloads (Pure)

• The origin of animals: can molecular clocks and the fossil record be reconciled?

  Cunningham, J. A., Liu, A. G., Bengtson, S. & Donoghue, P. C. J., 1 Jan 2017, In: BioEssays. 39, 1, 12 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Fauna 100%
  • Clock 66%
  • Fossil Record 50%
  • Metazoan 50%
  • Estimate 33%
  87 Citations (Scopus)

  677 Downloads (Pure)

• The Weng’an Biota (Doushantuo Formation): an Ediacaran window on soft bodied and multicellular microorganisms

  Cunningham, J. A., Vargas, K., Yin, Z., Bengtson, S. & Donoghue, P. C. J., 1 Sept 2017, In: Journal of the Geological Society. 174, 5, p. 793-802 10 p.

  Research output: Contribution to journal › Article (Academic Journal) › peer-review

  Open Access

  File

  • Biota 100%
  • Fauna 60%
  • Animals 60%
  • Fossils 60%
  • Shape 40%
  43 Citations (Scopus)

  581 Downloads (Pure)