TY - JOUR
T1 - A geometrical parametrization of C1′-C5′ RNA ribose chemical shifts calculated by density functional theory
AU - Suardíaz, Reynier
AU - Sahakyan, Aleksandr B.
AU - Vendruscolo, Michele
PY - 2013/7/21
Y1 - 2013/7/21
N2 - It has been recently shown that NMR chemical shifts can be used to determine the structures of proteins. In order to begin to extend this type of approach to nucleic acids, we present an equation that relates the structural parameters and the 13C chemical shifts of the ribose group. The parameters in the equation were determined by maximizing the agreement between the DFT-derived chemical shifts and those predicted through the equation for a database of ribose structures. Our results indicate that this type of approach represents a promising way of establishing quantitative and computationally efficient analytical relationships between chemical shifts and structural parameters in nucleic acids.
AB - It has been recently shown that NMR chemical shifts can be used to determine the structures of proteins. In order to begin to extend this type of approach to nucleic acids, we present an equation that relates the structural parameters and the 13C chemical shifts of the ribose group. The parameters in the equation were determined by maximizing the agreement between the DFT-derived chemical shifts and those predicted through the equation for a database of ribose structures. Our results indicate that this type of approach represents a promising way of establishing quantitative and computationally efficient analytical relationships between chemical shifts and structural parameters in nucleic acids.
UR - http://www.scopus.com/inward/record.url?scp=84884982470&partnerID=8YFLogxK
U2 - 10.1063/1.4811498
DO - 10.1063/1.4811498
M3 - Article (Academic Journal)
C2 - 23883004
AN - SCOPUS:84884982470
VL - 139
JO - Journal of Chemical Physics
JF - Journal of Chemical Physics
SN - 0021-9606
IS - 3
M1 - 034101
ER -