TY - JOUR
T1 - HATRIC-based identification of receptors for orphan ligands
AU - Sobotzki, Nadine
AU - Schafroth, Michael A.
AU - Rozanova, Alina
AU - Koetemann, Anika
AU - Marty, Florian
AU - Goetze, Sandra
AU - Yamauchi, Yohei
AU - Carreira, Erick M.
AU - Wollscheid, Bernd
PY - 2018/4/17
Y1 - 2018/4/17
N2 - Cellular responses depend on the interactions of extracellular ligands, such as nutrients, growth factors, or drugs, with specific cell-surface receptors. The sensitivity of these interactions to non-physiological conditions, however, makes them challenging to study using in vitro assays. Here we present HATRIC-based ligand receptor capture (HATRIC-LRC), a chemoproteomic technology that successfully identifies target receptors for orphan ligands on living cells ranging from small molecules to intact viruses. HATRIC-LRC combines a click chemistry-based, protein-centric workflow with a water-soluble catalyst to capture ligand-receptor interactions at physiological pH from as few as 1 million cells. We show HATRIC-LRC utility for general antibody target validation within the native nanoscale organization of the surfaceome, as well as receptor identification for a small molecule ligand. HATRIC-LRC further enables the identification of complex extracellular interactomes, such as the host receptor panel for influenza A virus (IAV), the causative agent of the common flu.
AB - Cellular responses depend on the interactions of extracellular ligands, such as nutrients, growth factors, or drugs, with specific cell-surface receptors. The sensitivity of these interactions to non-physiological conditions, however, makes them challenging to study using in vitro assays. Here we present HATRIC-based ligand receptor capture (HATRIC-LRC), a chemoproteomic technology that successfully identifies target receptors for orphan ligands on living cells ranging from small molecules to intact viruses. HATRIC-LRC combines a click chemistry-based, protein-centric workflow with a water-soluble catalyst to capture ligand-receptor interactions at physiological pH from as few as 1 million cells. We show HATRIC-LRC utility for general antibody target validation within the native nanoscale organization of the surfaceome, as well as receptor identification for a small molecule ligand. HATRIC-LRC further enables the identification of complex extracellular interactomes, such as the host receptor panel for influenza A virus (IAV), the causative agent of the common flu.
KW - Target identification
KW - Chemical tools
UR - http://www.scopus.com/inward/record.url?scp=85045722726&partnerID=8YFLogxK
U2 - 10.1038/s41467-018-03936-z
DO - 10.1038/s41467-018-03936-z
M3 - Article (Academic Journal)
C2 - 29666374
AN - SCOPUS:85045722726
SN - 2041-1723
VL - 9
JO - Nature Communications
JF - Nature Communications
M1 - 1519
ER -