Abstract
Clocklike rhythms are found in every organism, from bacteria to humans and
need to be perfectly synchronized in order to regulate the basic mechanisms for
life. Biological oscillators can synchronize even in noisy environments and despite
differences between the biochemical parameters of the clocks. Even if this
intrinsic robustness has stimulated several attempts to explain the emergence
synchronization phenomena, a systematic theoretical framework for its study is
still lacking.
This paper is concerned with a novel algorithm to study networks of biological
clocks. A new set of conditions is established that can be used to verify whether
an existing network synchronizes or to give guidelines to construct a new synthetic
network of biological oscillators that synchronize. The methodology uses
the so-called contraction theory from dynamical system theory and Gershgorin
disk theorem. The main features of our algorithm is that it explicitly takes into
account the presence of noise and parameter mismatches and provides simple
algebraic constraints on the parameters of the oscillator. The strategy is validated
on two examples: a model of glycolisis in yeast cells and a synthetic network of
Repressilators that synchronizes.
Translated title of the contribution | How to synchronize Biological Clocks |
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Original language | English |
Title of host publication | Unknown |
Publication status | Published - 2008 |
Structured keywords
- Engineering Mathematics Research Group