odML-Tables as a Metadata Standard in Microneurography

Alina Troglio; Aidan Nickerson; Fabian Schlebusch; Rainer Röhrig; Jim Dunham; Barbara Namer; Ekaterina  Kutafin

doi:10.3233/SHTI230687

odML-Tables as a Metadata Standard in Microneurography

Alina Troglio, Aidan Nickerson, Fabian Schlebusch, Rainer Röhrig, Jim Dunham, Barbara Namer, Ekaterina Kutafin

Research output: Chapter in Book/Report/Conference proceeding › Conference Contribution (Conference Proceeding)

2 Citations (Scopus)

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Abstract

Metadata is essential for handling medical data according to FAIR principles. Standards are well-established for many types of electrophysiological methods but are still lacking for microneurographic recordings of peripheral sensory nerve fibers in humans. Developing a new concept to enhance laboratory workflows is a complex process. We propose a standard for structuring and storing microneurography metadata based on odML and odML-tables. Further, we present an extension to the odML-tables GUI that enables user-friendly search functionality of the database. With our open-source repository, we encourage other microneurography labs to incorporate odML-based metadata into their experimental routines.

Original language	English
Title of host publication	Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany
Editors	Rainer Röhrig, Niels Grabe, Martin Haag, Ursula Hübner, Ulrich Sax, Carsten Oliver Schmidt, Martin Sedlmayr, Antonia Zap Zapf
Publisher	IOS Press
Pages	3-11
Number of pages	9
Volume	307
ISBN (Electronic)	9781643684291
ISBN (Print)	9781643684284
DOIs	https://doi.org/10.3233/SHTI230687
Publication status	Published - 22 Sept 2023
Event	68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology - Heilbronn, Baden-Württemberg, Germany, Heilbronn, Germany Duration: 17 Sept 2023 → 21 Sept 2023 https://www.gmds2023.de/

Publication series

Name	Studies in Health Technology and Informatics
Publisher	IOS Press
ISSN (Print)	926-9630
ISSN (Electronic)	1879-8365

Conference

Conference	68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology
Country/Territory	Germany
City	Heilbronn
Period	17/09/23 → 21/09/23
Internet address	https://www.gmds2023.de/

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10.3233/SHTI230687Licence: CC BY-NC

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Troglio, A., Nickerson, A., Schlebusch, F., Röhrig, R., Dunham, J., Namer, B., & Kutafin, E. (2023). odML-Tables as a Metadata Standard in Microneurography. In R. Röhrig, N. Grabe, M. Haag, U. Hübner, U. Sax, C. Oliver Schmidt, M. Sedlmayr, & A. Z. Zapf (Eds.), Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany (Vol. 307, pp. 3-11). (Studies in Health Technology and Informatics). IOS Press. https://doi.org/10.3233/SHTI230687

Troglio, Alina ; Nickerson, Aidan ; Schlebusch, Fabian et al. / odML-Tables as a Metadata Standard in Microneurography. Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany. editor / Rainer Röhrig ; Niels Grabe ; Martin Haag ; Ursula Hübner ; Ulrich Sax ; Carsten Oliver Schmidt ; Martin Sedlmayr ; Antonia Zap Zapf. Vol. 307 IOS Press, 2023. pp. 3-11 (Studies in Health Technology and Informatics).

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title = "odML-Tables as a Metadata Standard in Microneurography",

abstract = "Metadata is essential for handling medical data according to FAIR principles. Standards are well-established for many types of electrophysiological methods but are still lacking for microneurographic recordings of peripheral sensory nerve fibers in humans. Developing a new concept to enhance laboratory workflows is a complex process. We propose a standard for structuring and storing microneurography metadata based on odML and odML-tables. Further, we present an extension to the odML-tables GUI that enables user-friendly search functionality of the database. With our open-source repository, we encourage other microneurography labs to incorporate odML-based metadata into their experimental routines. ",

author = "Alina Troglio and Aidan Nickerson and Fabian Schlebusch and Rainer R{\"o}hrig and Jim Dunham and Barbara Namer and Ekaterina Kutafin",

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booktitle = "Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany",

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Troglio, A, Nickerson, A, Schlebusch, F, Röhrig, R, Dunham, J, Namer, B & Kutafin, E 2023, odML-Tables as a Metadata Standard in Microneurography. in R Röhrig, N Grabe, M Haag, U Hübner, U Sax, C Oliver Schmidt, M Sedlmayr & AZ Zapf (eds), Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany. vol. 307, Studies in Health Technology and Informatics, IOS Press, pp. 3-11, 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology, Heilbronn, Germany, 17/09/23. https://doi.org/10.3233/SHTI230687

odML-Tables as a Metadata Standard in Microneurography. / Troglio, Alina; Nickerson, Aidan; Schlebusch, Fabian et al.
Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany. ed. / Rainer Röhrig; Niels Grabe; Martin Haag; Ursula Hübner; Ulrich Sax; Carsten Oliver Schmidt; Martin Sedlmayr; Antonia Zap Zapf. Vol. 307 IOS Press, 2023. p. 3-11 (Studies in Health Technology and Informatics).

Research output: Chapter in Book/Report/Conference proceeding › Conference Contribution (Conference Proceeding)

TY - GEN

T1 - odML-Tables as a Metadata Standard in Microneurography

AU - Troglio, Alina

AU - Nickerson, Aidan

AU - Schlebusch, Fabian

AU - Röhrig, Rainer

AU - Dunham, Jim

AU - Namer, Barbara

AU - Kutafin, Ekaterina

PY - 2023/9/22

Y1 - 2023/9/22

N2 - Metadata is essential for handling medical data according to FAIR principles. Standards are well-established for many types of electrophysiological methods but are still lacking for microneurographic recordings of peripheral sensory nerve fibers in humans. Developing a new concept to enhance laboratory workflows is a complex process. We propose a standard for structuring and storing microneurography metadata based on odML and odML-tables. Further, we present an extension to the odML-tables GUI that enables user-friendly search functionality of the database. With our open-source repository, we encourage other microneurography labs to incorporate odML-based metadata into their experimental routines.

AB - Metadata is essential for handling medical data according to FAIR principles. Standards are well-established for many types of electrophysiological methods but are still lacking for microneurographic recordings of peripheral sensory nerve fibers in humans. Developing a new concept to enhance laboratory workflows is a complex process. We propose a standard for structuring and storing microneurography metadata based on odML and odML-tables. Further, we present an extension to the odML-tables GUI that enables user-friendly search functionality of the database. With our open-source repository, we encourage other microneurography labs to incorporate odML-based metadata into their experimental routines.

U2 - 10.3233/SHTI230687

DO - 10.3233/SHTI230687

M3 - Conference Contribution (Conference Proceeding)

C2 - 37697832

SN - 9781643684284

VL - 307

T3 - Studies in Health Technology and Informatics

SP - 3

EP - 11

BT - Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany

A2 - Röhrig, Rainer

A2 - Grabe, Niels

A2 - Haag, Martin

A2 - Hübner, Ursula

A2 - Sax, Ulrich

A2 - Oliver Schmidt, Carsten

A2 - Sedlmayr, Martin

A2 - Zapf, Antonia Zap

PB - IOS Press

T2 - 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology

Y2 - 17 September 2023 through 21 September 2023

ER -

Troglio A, Nickerson A, Schlebusch F, Röhrig R, Dunham J, Namer B et al. odML-Tables as a Metadata Standard in Microneurography. In Röhrig R, Grabe N, Haag M, Hübner U, Sax U, Oliver Schmidt C, Sedlmayr M, Zapf AZ, editors, Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany. Vol. 307. IOS Press. 2023. p. 3-11. (Studies in Health Technology and Informatics). doi: 10.3233/SHTI230687

odML-Tables as a Metadata Standard in Microneurography

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