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Reactome Pengine: a web-logic API to the Homo sapiens reactome

Research output: Contribution to journalArticle

Original languageEnglish
Article numberbty181
Pages (from-to)2856-2858
Number of pages3
JournalBioinformatics
Volume34
Issue number16
Early online date30 Mar 2018
DOIs
DateAccepted/In press - 28 Mar 2018
DateE-pub ahead of print - 30 Mar 2018
DatePublished (current) - 15 Aug 2018

Abstract

Existing ways of accessing data from the Reactome database are limited. Either a researcher is restricted to particular queries defined by a web application programming interface (API) or they have to download the whole database. Reactome Pengine is a web service providing a logic programming-based API to the human reactome. This gives researchers greater flexibility in data access than existing APIs, as users can send their own small programs (alongside queries) to Reactome Pengine.

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  • Full-text PDF (accepted author manuscript)

    Rights statement: This is the author accepted manuscript (AAM). The final published version (version of record) is available online via Oxford University Press a https://academic.oup.com/bioinformatics/article/34/16/2856/4956665 . Please refer to any applicable terms of use of the publisher.

    Final published version, 444 KB, PDF document

    Licence: CC BY

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