Projects per year
Abstract
Molecular clock methodology provides the best means of establishing evolutionary timescales, the accuracy and precision of which remains reliant on calibration, traditionally based on fossil constraints on clade (node) ages. Tip-calibration has been developed to obviate undesirable aspects of node calibration, including the need for maximum age constraints that are invariably very difficult to justify. Instead, tip-calibration incorporates fossil species as dated tips alongside living relatives, potentially improving the accuracy and precision of divergence time estimates. We demonstrate that tip-calibration yields node calibrations that violate fossil evidence, contributing to unjustifiably young and ancient age estimates, less precise and (presumably) accurate than conventional node calibration. However, we go on to show that node and tip calibrations are complementary, producing meaningful age estimates, with node minima enforcing realistic ages and fossil tips interacting with node calibrations to objectively define maximum age constraints on clade ages. Together, tip and node calibration may yield evolutionary timescales that are better justified, more precise and accurate than either calibration strategy can achieve alone.
Original language | English |
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Article number | 20150975 |
Number of pages | 9 |
Journal | Biology Letters |
Volume | 12 |
Issue number | 4 |
DOIs | |
Publication status | Published - 19 Apr 2016 |
Keywords
- Calibration
- Hymenoptera
- Molecular clock
- Node
- Tip
Fingerprint
Dive into the research topics of 'Tips and nodes are complimentary not competing approaches to the calibration of molecular clocks'. Together they form a unique fingerprint.Projects
- 3 Finished
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Improving Bayesian methods for estimating divergence times integrating genomic and trait data
Donoghue, P. C. J. (Principal Investigator)
25/03/16 → 31/12/21
Project: Research
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The origin of plants: genomes, rocks, and biochemical cycles./
Donoghue, P. C. J. (Principal Investigator)
1/01/16 → 31/12/18
Project: Research
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Bayesian Estimation of Species Divergence Times Integrating Both Fossil and Molecular Information
Donoghue, P. C. J. (Principal Investigator)
18/05/12 → 18/05/15
Project: Research
Equipment
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HPC (High Performance Computing) and HTC (High Throughput Computing) Facilities
Alam, S. R. (Manager), Eccleston, P. E. (Other), Williams, D. A. G. (Manager) & Atack, S. H. (Other)
Facility/equipment: Facility