Research Outputs
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Discovery and biosynthetic assessment of 'Streptomyces ortus' sp. nov. isolated from a deep-sea sponge
Williams, S. E., Back, C. R., Best, E., Mantell, J., Stach, J. E. M., Williams, T. A., Race, P. R. & Curnow, P., 11 May 2023, In: Microbial Genomics. 9, 5, 14 p., 000996.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access3 Citations (Scopus) -
Domain shuffling of a highly mutable ligand binding fold drives adhesin generation across the bacterial kingdom
Barringer, R. W. L., Parnell, A. E., Lafita, A., Monzon, V., Back, C., Madej, M., Potempa, J., Nobbs, A. H., Burston, S. G., Bateman, A. & Race, P. R., 13 Mar 2023, (E-pub ahead of print) In: Proteins: Structure, Function, and Bioinformatics. 91, 8, p. 1007-1020 14 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access -
Effective design and inference for cell sorting and sequencing based massively parallel reporter assays
Gilliot, P.-A. M. A. & Gorochowski, T. E., 1 May 2023, In: Bioinformatics. 39, 5, btad277.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access3 Citations (Scopus) -
Evaluation and deployment of isotype-specific salivary antibody assays for detecting previous SARS-CoV-2 infection in children and adults
Thomas, A., Oliver, E. H., Baum, H. E., Gupta, K., Shelley, K. L., Long, A. E., Jones, H. E., Smith, J., Hitchings, B. E., Di Bartolo, N. D., Vasileiou, K., Rabi, F. A., Alamir, H. I. A., Eghleilib, M. A., Francis, O., Oliver, J. L., Morales-Aza, B., Obst, U., Shattock, D. J. & Barr, R. S. & 21 others, , 15 Mar 2023, In: Communications Medicine. 3, 1, 14 p., 37.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access7 Citations (Scopus) -
In-silico and in-vitro morphometric analysis of intestinal organoids
Montes Olivas, S., Legge, D. N., Lund, A., Fletcher, A. G., Williams, A. C., Marucci, L. & Homer, M. E., 14 Aug 2023, In: PLoS Computational Biology. 19, 8, e1011386.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access4 Citations (Scopus) -
In situ Time-Resolved Spectroelectrochemistry Reveals Limitations of Biohybrid Photoelectrode Performance
Nawrocki, W. J., Jones , M. R., Frese, R. N., Croce, R. & Friebe, V. M., 15 Mar 2023, In: Joule. 7, 3, p. 529-544 16 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile10 Citations (Scopus)16 Downloads (Pure) -
In vitro generated antibodies guide thermostable ADDomer nanoparticle design for nasal vaccination and passive immunization against SARS-CoV-2
Buzas, D., Bunzel, A. H., Staufer, O., Milodowski, E. J., Edmunds, G. L., Bufton, J. C., Vidana mateo, B. V., Yadav, S. K. N., Gupta, K., Fletcher, C., Williamson, M. K., Harrison, A., Borucu, U., Capin, J., Francis, O., Balchin, G., Hall, S., Vega, M. V., Durbesson, F. & Lingappa, S. & 17 others, , 17 Oct 2023, In: Antibody Therapeutics. 6, 4, p. 277-297Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access1 Citation (Scopus) -
Membranized Coacervate Microdroplets: from Versatile Protocell Models to Cytomimetic Materials
Gao, N. & Mann, S., 7 Feb 2023, In: Accounts of Chemical Research. 56, 3, p. 297-307 11 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access64 Citations (Scopus) -
Molecular Mechanism of STIL Coiled-Coil Domain Oligomerization
Shamir, M., Martin, F., Woolfson, D. N. & Friedler, A., 27 Sept 2023, In: International Journal of Molecular Sciences. 24, 19, 14 p., 14616.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access -
Nonsense-Mediated mRNA Decay Factor Functions in Human Health and Disease
Sun, L., Mailliot, J. M. & Berger-Schaffitzel, C. H., 27 Feb 2023, In: Biomedicines. 11, 3, 722.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access10 Citations (Scopus) -
Numerical methods for control-based continuation of relaxation oscillations
Blyth, M. D., Tsaneva-Atanasova, K. T., Marucci, L. & Renson, L., 15 Feb 2023, In: Nonlinear Dynamics. 111, 9, p. 7975-7992 18 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access3 Citations (Scopus) -
Rational Design of Phosphorylation-Responsive Coiled Coil-Peptide Assemblies
Thompson, H. F., Beesley, J. L., Langlands, H. D., Edgell, C. L., Savery, N. J. & Woolfson, D. N., 29 Mar 2023, In: ACS Synthetic Biology. 12, 4, p. 1308–1319 12 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access2 Citations (Scopus) -
SARS-CoV-2 spike variants differ in their allosteric responses to linoleic acid
Oliveira, A. S. F., Shoemark, D. K., Davidson, A. D., Berger, I., Schaffitzel, C. & Mulholland, A. J., 29 Mar 2023, In: Journal of molecular cell biology. 15, 3, 12 p., mjad021.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access4 Citations (Scopus) -
Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting
Tarnowski, M. J., Varliero, G., Scown, J., Phelps, E. & Gorochowski, T. E., 15 Nov 2023, In: Royal Society Open Science. 10, 11, 14 p., 230963.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access2 Citations (Scopus) -
Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022
König, M., Gleeson, P., Golebiewski, M., Gorochowski, T. E., Hucka, M., Keating, S. M., Myers, C., Nickerson, D. P., Sommer, B., Waltemath, D. & Schreiber, F., 29 Mar 2023, In: Journal of Integrative Bioinformatics. 20, 1, 20230004.Research output: Contribution to journal › Editorial (Academic Journal)
Open Access2 Citations (Scopus) -
Synthetic biology open language (SBOL) version 3.1.0
Buecherl, L., Mitchell, T., Scott-Brown, J., Vaidyanathan, P., Vidal, G., Baig, H., Bartley, B., Beal, J., Crowther, M., Fontanarrosa, P., Gorochowski, T. E., Grünberg, R., Kulkarni, V., McLaughlin, J., Misirli, G., Oberortner, E., Wipat, A. & Myers, C., 13 Mar 2023, In: Journal of Integrative Bioinformatics. 20, 1, 20220058.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access -
Ten simple rules for managing laboratory information
Berezin, C.-T., Aguilera, L. U., Billerbeck, S., Bourne, P. E., Densmore, D., Freemont, P., Gorochowski, T. E., Hernandez, S. I., Hillson, N. J., King, C. R., Köpke, M., Ma, S., Miller, K. M., Moon, T. S., Moore, J. H., Munsky, B., Myers, C. J., Nicholas, D. A., Peccoud, S. J. & Zhou, W. & 1 others, , 7 Dec 2023, In: PLoS Computational Biology. 19, 12, e1011652.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access3 Citations (Scopus) -
Understanding a protein fold: the physics, chemistry, and biology of α-helical coiled coils
Woolfson, D. N., 3 Mar 2023, In: Journal of Biological Chemistry. 299, 4, 104579.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access40 Citations (Scopus) -
X-ray structure of the metastable SEPT14–SEPT7 coiled coil reveals a hendecad region crucial for heterodimerization
Cavini, I. A., Winter, A. J., D'Muniz Pereira, H., Woolfson, D. N., Crump, M. P. & Garratt, R., 25 Sept 2023, In: Acta Crystallographica Section D: Structural Biology. D79, p. 881–894 14 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
1 Citation (Scopus) -
A Functional Interaction Between Y674-R685 Region of the SARS-CoV-2 Spike Protein and the Human α7 Nicotinic Receptor
Chrestia, J. F., Oliveira, A., Mulholland, A. J., Gallagher , T., Bermudez, I. & Bouzat, C., 20 Jul 2022, In: Molecular Neurobiology. 59, 10, p. 6076-6090 15 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
15 Citations (Scopus) -
BNIP3L/NIX regulates both mitophagy and pexophagy
Wilhelm, L. P., Zapata-Muñoz, J., Villarejo-Zori, B., Pellegrin, S., Freire, C. M., Toye, A. M., Boya, P. & Ganley, I. G., 10 Oct 2022, (E-pub ahead of print) In: EMBO Journal. 41, 24, 19 p., e111115.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile48 Citations (Scopus)126 Downloads (Pure) -
Bottom-up assembly of target-specific cytotoxic synthetic cells
Hernandez Bücher, J. E., Staufer, O., Ostertag, L., Mersdorf, U., Platzman, I. & Spatz, J. P., 13 Apr 2022, In: Biomaterials. 285, 121522.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open Access19 Citations (Scopus) -
Bottom-up assembly of viral replication cycles
Staufer, O., Gantner, G., Platzman, I., Tanner, K., Berger, I. & Spatz, J. P., 2 Nov 2022, In: Nature Communications. 13, 1, 6530.Research output: Contribution to journal › Review article (Academic Journal) › peer-review
Open AccessFile3 Citations (Scopus)45 Downloads (Pure) -
Characterization of the molecular mechanisms of silicon uptake in coccolithophores
Ratcliffe, S., Meyer, E. M., Walker, C. E., Knight, M., McNair, H. M., Matson, P. G., Iglesias-Rodriguez, D., Brzezinski, M., Langer, G., Sadekov, A., Greaves, M., Brownlee, C., Curnow, P., Taylor, A. R. & Wheeler, G. L., 17 Nov 2022, (E-pub ahead of print) In: Environmental Microbiology.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile69 Downloads (Pure) -
De novo designed peptides for cellular delivery and subcellular localisation
Rhys, G. G., Cross, J. A., Dawson, W. M., Thompson, H. F., Shanmugaratnam, S., Savery, N. J., Dodding, M. P., Höcker, B. & Woolfson, D. N., 1 Sept 2022, In: Nature Chemical Biology. 18, 9, p. 999-1004 6 p.Research output: Contribution to journal › Article (Academic Journal) › peer-review
Open AccessFile21 Citations (Scopus)290 Downloads (Pure)