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In-Silico Analysis and Implementation of a Multicellular Feedback Control Strategy in a Synthetic Bacterial Consortium

Research output: Contribution to journalArticle

Original languageEnglish
Pages (from-to)507–517
Number of pages11
JournalACS Synthetic Biology
Volume6
Journal issue3
Early online date20 Dec 2016
DOIs
StatePublished - 17 Mar 2017

Abstract

Living organisms employ endogenous negative feedback loops to maintain homeostasis despite environmental fluctuations. A pressing open challenge in Synthetic Biology is to design and implement synthetic circuits to control host cells' behavior, in order to regulate and maintain desired conditions. To cope with the high degree of circuit complexity required to accomplish this task and the intrinsic modularity of classical control schemes, we suggest the implementation of synthetic endogenous feedback loops across more than one cell population. The distribution of the sensing, computation and actuation functions required to achieve regulation across different cell populations within a consortium allows the genetic engineering in a particular cell to be reduced, increases the robustness, and makes it possible to reuse the synthesized modules for different control applications. Here, we analyze, in-silico, the design of a synthetic feedback controller implemented across two cell populations in a consortium. We study the effects of distributing the various functions required to build a control system across two populations, prove the robustness and modularity of the strategy described and provide a computational proof-of-concept of its feasibility.

    Structured keywords

  • BioDesign

    Research areas

  • E. coli, feedback control, gene networks, mathematical modeling, synthetic biology, synthetic microbial consortia

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    Rights statement: This is the author accepted manuscript (AAM). The final published version (version of record) is available online via ACS at http://pubs.acs.org/doi/abs/10.1021/acssynbio.6b00220. Please refer to any applicable terms of use of the publisher.

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    Embargo ends: 8/12/17

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